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SALMON(1) User Commands SALMON(1)

NAME

salmon - highly-accurate, transcript-level quantification estimates from RNA-seq data

SYNOPSIS

salmon -h|--help or

DESCRIPTION

salmon v0.12.0
salmon -v|--version or salmon -c|--cite or salmon [--no-version-check] <COMMAND> [-h | options]

Commands:

index Create a salmon index quant Quantify a sample alevin single cell analysis swim Perform super-secret operation quantmerge Merge multiple quantifications into a single file
January 2019 salmon 0.12.0