NAME¶
PermuteFlipImageOrientationAxes - part of ANTS registration suite
DESCRIPTION¶
Usage: ./PermuteFlipImageOrientationAxes ImageDimension inputImageFile
outputImageFile xperm yperm {zperm} xflip yflip {zflip} {FlipAboutOrigin}
- for 3D:
- ./PermuteFlipImageOrientationAxes 3 in.nii out.nii 2 0 1 1
1 1
- would map z=>x, x=>y, y=>z and flip each for 2D:
./PermuteFlipImageOrientationAxes 2 in.nii out.nii 1 0 1 0 would map
x=>y, y=>x and flip x
- 0 1 2 for permute factors gives no axis permutation 1 2 0
maps y to x, z to y and x to z the flip values are boolean - 0 1 0 would
flip the y-axis only
- The FlipAboutOrigin boolean lets you flip about the
coordinate set in the origin