NAME¶

ANTSJacobian - part of ANTS registration suite

SYNOPSIS¶

ANTSJacobian ImageDim gWarp outfile uselog maskfn normbytotalbool use-2nd-order-central-difference-boolean

DESCRIPTION¶

for example ANTSJacobian 3 myWarp.nii Output 1 templatebrainmask.nii 1 the last 1 normalizes the jacobian by the total in the mask. use this to adjust for head size.