.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.40.9.
.TH ANTSJACOBIAN "1" "May 2012" "ANTSJacobian 1.9" "User Commands"
.SH NAME
ANTSJacobian \- part of ANTS registration suite
.SH SYNOPSIS
.B ANTSJacobian
\fIImageDim gWarp outfile uselog maskfn normbytotalbool use-2nd-order-central-difference-boolean\fR
.SH DESCRIPTION
.IP
for example
ANTSJacobian 3  myWarp.nii   Output  1   templatebrainmask.nii   1
the last 1 normalizes the jacobian by the total in the mask.  use this to adjust for head size.