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alignment-info(1) alignment-info(1)

NAME

alignment-info - Show useful statistics about the alignment.

SYNOPSIS

alignment-info alignment-file [tree-file] [OPTIONS]

DESCRIPTION

Show useful statistics about the alignment.

ALLOWED OPTIONS:

produce help message
–align arg
file with sequences and initial alignment
–tree arg
file with initial tree
–alphabet arg
specify the alphabet: DNA, RNA, Amino-Acids, Triplets, or Codons
Print the sequence-names and exit
Print the sequence-lengths and exit

REPORTING BUGS:

BAli-Phy online help: <http://www.bali-phy.org/docs.php>.

Please send bug reports to <bali-phy-users@googlegroups.com>.

AUTHORS

Benjamin Redelings.

Feb 2018