Scroll to navigation

alignment-info(1) alignment-info(1)

NAME

alignment-info - Show useful statistics about the alignment.

SYNOPSIS

alignment-info alignment-file [tree-file] [OPTIONS]

DESCRIPTION

Show useful statistics about the alignment.

ALLOWED OPTIONS:

-h, --help
produce help message
--align arg
file with sequences and initial alignment
--tree arg
file with initial tree
--alphabet arg
specify the alphabet: DNA, RNA, Amino-Acids, Triplets, or Codons
-N, --show-names
Print the sequence-names and exit
-L, --show-lengths
Print the sequence-lengths and exit

REPORTING BUGS:

BAli-Phy online help: <http://www.bali-phy.org/docs.php>.

Please send bug reports to <bali-phy-users@googlegroups.com>.

AUTHORS

Benjamin Redelings.
Feb 2018