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RABEMA_PREPARE_SAM(1) User Commands RABEMA_PREPARE_SAM(1)

NAMEΒΆ

rabema_prepare_sam - Prepare SAM For Rabema

SYNOPSIS

rabema_prepare_sam -i IN.sam -o OUT.sam

DESCRIPTION

Prepare SAM file for usage with RABEMA.

OPTIONS

-h, --help

Display the help message.

--version-check BOOL

Turn this option off to disable version update notifications of the application. One of 1, ON, TRUE, T, YES, 0, OFF, FALSE, F, and NO. Default: 1.

--version

Display version information.

-i, --in-file INPUT_FILE

Path to the input file. Valid filetype is: .sam.

-o, --out-file OUTPUT_FILE

Path to the output file. Valid filetype is: .sam.

--dont-check-sorting

Do not check sortedness.

VERSION

Last update: rabema_prepare_sam version: 1.2.8 [tarball] SeqAn version: 2.3.1
June 2017 rabema_prepare_sam 2.3.1+dfsg-4