table of contents
other versions
- stretch 1.1.2-3
- testing 1.1.4-2+b2
- stretch-backports 1.1.4-2~bpo9+1
- unstable 1.1.4-2+b2
BLAST_TOP_HITS(1) | User Commands | BLAST_TOP_HITS(1) |
NAME¶
blast_top_hits - reduces a blast or blat output file to the top hit for each query sequence onlySYNOPSIS¶
blast_top_hits --input blast_out --mode blast <options>DESCRIPTION¶
Reduces a blast or blat output file to the top hit for each query sequence only.This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).
OPTIONS¶
Required¶
- --input
- BLAST output file in -m 6/-outfmt 6 or BLAT .psl file
- --mode
- Either blast or blat
Optional¶
- --full_query
- The entire query must be reported as a match to appear in the output
- -h, --help
- Shows this help.
AUTHOR¶
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.March 2017 | blast_top_hits 1.1.2 |