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BLAST_TOP_HITS(1) User Commands BLAST_TOP_HITS(1)

NAME

blast_top_hits - reduces a blast or blat output file to the top hit for each query sequence only

SYNOPSIS

blast_top_hits --input blast_out --mode blast <options>

DESCRIPTION

Reduces a blast or blat output file to the top hit for each query sequence only.

This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).

OPTIONS

Required

BLAST output file in -m 6/-outfmt 6 or BLAT .psl file
Either blast or blat

Optional

The entire query must be reported as a match to appear in the output
Shows this help.

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

March 2017 blast_top_hits 1.1.2