NAME¶
mapsembler2_extremities - manual page for mapsembler2_extremities 2.2.3+dfsg
DESCRIPTION¶
Error : Option '--k' is mandatory Error : Option '--starters' is mandatory Error
: Option '--reads' is mandatory Error : Option '--output' is mandatory USAGE
for 'mapsembler2_extremities'
- --k
- (1 arg) : kmer size that will be used for mapsembler2 [default '']
- --starters
- (1 arg) : starters fasta file [default '']
- --reads
- (1 arg) : reads dataset file name. Several reads sets can be provided,
surrounded by "'s and separated by a space (e.g. --reads
"reads1.fa reads2.fa") [default '']
- --output
- (1 arg) : output substarters file name [default '']
- --min-solid-subkmer (1 arg) :
- minimim abundance to keep a subkmer [default '3']
- -debug
- (0 arg) : debugging
- -nb-cores
- (1 arg) : number of cores [default '0']
- -verbose
- (1 arg) : verbosity level [default '1']
- -help
- (0 arg) : display help about possible options
SEE ALSO¶
The full documentation for mapsembler2_extremities is maintained as a
Texinfo manual. If the info and mapsembler2_extremities programs
are properly installed at your site, the command
- info mapsembler2_extremities
should give you access to the complete manual.
