other versions
- jessie-backports 0.10.5~beta-1~bpo8+1
- stretch 0.10.5~beta-2+b1
- testing 1.1-2
- stretch-backports 1.1-2~bpo9+1
- unstable 1.1-3
KRAKEN-MPA-REPORT(1) | User Commands | KRAKEN-MPA-REPORT(1) |
NAME¶
kraken-mpa-report - assigning taxonomic labels to short DNA sequencesSYNOPSIS¶
kraken-mpa-report [ --db KRAKEN_DB_NAME] [options] <kraken output file(s)>OPTIONS¶
- --db NAME
- Name of Kraken database (default: none)
- --show-zeros
- Display taxa even if they lack a read in any sample
- --header-line
- Display a header line indicating sample IDs (sample IDs are the filenames)
- --intermediate-ranks
- Display taxa not at the standard ranks with x__ prefix
September 2015 | kraken-mpa-report 0.10.5~beta |