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KRAKEN-MPA-REPORT(1) User Commands KRAKEN-MPA-REPORT(1)

NAME

kraken-mpa-report - assigning taxonomic labels to short DNA sequences

SYNOPSIS

kraken-mpa-report [--db KRAKEN_DB_NAME] [options] <kraken output file(s)>

OPTIONS

Name of Kraken database (default: none)
Display taxa even if they lack a read in any sample
Display a header line indicating sample IDs (sample IDs are the filenames)
Display taxa not at the standard ranks with x__ prefix
September 2015 kraken-mpa-report 0.10.5~beta