kalign - Global and progressive multiple sequence alignment
kalign-avx2 -i <seq file> -o <out aln>
Passing sequences via stdin:
- cat input.fa | kalign -f fasta > out.afa
Combining multiple input files:
- kalign seqsA.fa seqsB.fa seqsC.fa -f fasta > combined.afa
Copyright © 2006,2019,2020 Timo Lassmann
This program comes with ABSOLUTELY NO WARRANTY; for details type:
This is free software, and you are welcome to redistribute it under certain conditions; consult the COPYING file for details.
- Lassmann, Timo. "Kalign 3: multiple sequence alignment of large data sets." Bioinformatics (2019) https://doi.org/10.1093/bioinformatics/btz795
This manpage was written by Nilesh Patra for the Debian
can be used for any other usage of the program.
|August 2020||kalign 3.2.3|