NAME¶

bustools - manual page for bustools 0.40.0

SYNOPSIS¶

bustools <CMD> [arguments] ..

DESCRIPTION¶

bustools 0.40.0

Where <CMD> can be one of:

sort Sort a BUS file by barcodes and UMIs correct Error correct a BUS file count Generate count matrices from a BUS file inspect Produce a report summarizing a BUS file whitelist Generate a whitelist from a BUS file project Project a BUS file to gene sets capture Capture records from a BUS file merge Merge bus files from same experiment text Convert a binary BUS file to a tab-delimited text file extract Extract FASTQ reads correspnding to reads in BUS file linker Remove section of barcodes in BUS files version Prints version number cite Prints citation information

Running bustools <CMD> without arguments prints usage information for <CMD>

Usage: bustools <CMD> [arguments] ..

Where <CMD> can be one of:

sort Sort a BUS file by barcodes and UMIs correct Error correct a BUS file count Generate count matrices from a BUS file inspect Produce a report summarizing a BUS file whitelist Generate a whitelist from a BUS file project Project a BUS file to gene sets capture Capture records from a BUS file merge Merge bus files from same experiment text Convert a binary BUS file to a tab-delimited text file extract Extract FASTQ reads correspnding to reads in BUS file linker Remove section of barcodes in BUS files version Prints version number cite Prints citation information

Running bustools <CMD> without arguments prints usage information for <CMD>

SEE ALSO¶

The full documentation for bustools is maintained as a Texinfo manual. If the info and bustools programs are properly installed at your site, the command

info bustools

should give you access to the complete manual.