.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.15.
.TH BUSTOOLS "1" "May 2020" "bustools 0.40.0" "User Commands"
.SH NAME
bustools \- manual page for bustools 0.40.0
.SH SYNOPSIS
.B bustools
\fI\,<CMD> \/\fR[\fI\,arguments\/\fR] ..
.SH DESCRIPTION
bustools 0.40.0
.PP
Where <CMD> can be one of:
.PP
sort            Sort a BUS file by barcodes and UMIs
correct         Error correct a BUS file
count           Generate count matrices from a BUS file
inspect         Produce a report summarizing a BUS file
whitelist       Generate a whitelist from a BUS file
project         Project a BUS file to gene sets
capture         Capture records from a BUS file
merge           Merge bus files from same experiment
text            Convert a binary BUS file to a tab\-delimited text file
extract         Extract FASTQ reads correspnding to reads in BUS file
linker          Remove section of barcodes in BUS files
version         Prints version number
cite            Prints citation information
.PP
Running bustools <CMD> without arguments prints usage information for <CMD>
.PP
Usage: bustools <CMD> [arguments] ..
.PP
Where <CMD> can be one of:
.PP
sort            Sort a BUS file by barcodes and UMIs
correct         Error correct a BUS file
count           Generate count matrices from a BUS file
inspect         Produce a report summarizing a BUS file
whitelist       Generate a whitelist from a BUS file
project         Project a BUS file to gene sets
capture         Capture records from a BUS file
merge           Merge bus files from same experiment
text            Convert a binary BUS file to a tab\-delimited text file
extract         Extract FASTQ reads correspnding to reads in BUS file
linker          Remove section of barcodes in BUS files
version         Prints version number
cite            Prints citation information
.PP
Running bustools <CMD> without arguments prints usage information for <CMD>
.SH "SEE ALSO"
The full documentation for
.B bustools
is maintained as a Texinfo manual.  If the
.B info
and
.B bustools
programs are properly installed at your site, the command
.IP
.B info bustools
.PP
should give you access to the complete manual.