table of contents
trjcat(1) | GROMACS suite, VERSION 4.5.4-dev-20110404-bc5695c | trjcat(1) |
NAME¶
trjcat - concatenates trajectory filesSYNOPSIS¶
trjcat -f traj.xtc -o trajout.xtc -n index.ndx -demux remd.xvg -[no]h -[no]version -nice int -tu enum -xvg enum -b time -e time -dt time -prec int -[no]vel -[no]settime -[no]sort -[no]keeplast -[no]overwrite -[no]catDESCRIPTION¶
trjcat concatenates several input trajectory files in sorted order. In case of double time frames the one in the later file is used. By specifying -settime you will be asked for the start time of each file. The input files are taken from the command line, such that a command like trjcat -f *.trr -o fixed.trr should do the trick. Using -cat, you can simply paste several files together without removal of frames with identical time stamps.FILES¶
-f traj.xtc Input, Mult.Trajectory: xtc trr trj gro g96 pdb cpt
Trajectory: xtc trr trj gro g96 pdb
Index file
xvgr/xmgr file
OTHER OPTIONS¶
-[no]hnoPrint help info and quit
Print version info and quit
Set the nicelevel
Time unit: fs, ps, ns, us, ms or s
xvg plot formatting: xmgrace, xmgr or none
First time to use (ps)
Last time to use (ps)
Only write frame when t MOD dt = first time (ps)
Precision for .xtc and .gro writing in number of decimal places
Read and write velocities if possible
Change starting time interactively
Sort trajectory files (not frames)
Keep overlapping frames at end of trajectory
Overwrite overlapping frames during appending
Do not discard double time frames
SEE ALSO¶
gromacs(7)Mon 4 Apr 2011 |