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other versions
- wheezy 4.5.5-2
ngmx(1) | GROMACS suite, VERSION 4.5.4-dev-20110404-bc5695c | ngmx(1) |
NAME¶
ngmx - displays a trajectorySYNOPSIS¶
ngmx -f traj.xtc -s topol.tpr -n index.ndx -[no]h -[no]version -nice int -b time -e time -dt timeDESCRIPTION¶
ngmx is the GROMACS trajectory viewer. This program reads a trajectory file, a run input file and an index file and plots a 3D structure of your molecule on your standard X Window screen. No need for a high end graphics workstation, it even works on Monochrome screens.FILES¶
-f traj.xtc InputTrajectory: xtc trr trj gro g96 pdb cpt
Run input file: tpr tpb tpa
Index file
OTHER OPTIONS¶
-[no]hnoPrint help info and quit
Print version info and quit
Set the nicelevel
First frame (ps) to read from trajectory
Last frame (ps) to read from trajectory
Only use frame when t MOD dt = first time (ps)
KNOWN PROBLEMS¶
- Balls option does not workSEE ALSO¶
gromacs(7)Mon 4 Apr 2011 |