DBSHOWQUERY(1e) | EMBOSS Manual for Debian | DBSHOWQUERY(1e) |
NAME¶
dbshowquery - Show possible database queries that use a given data identifierSYNOPSIS¶
dbshowquery
-identifier string
-database string
-datatype string [
-outfile outfile] [
-html boolean]
dbshowquery
-help
DESCRIPTION¶
dbshowquery is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Information" command group(s).OPTIONS¶
Input section¶
-identifier stringThis is a data identifier (e.g. a sequence
accession number) that is used to specify the data (of type 'datatype') to
retrieve. If you're unsure of the data identifier(s) that are used for a given
query (database/datatype) use dbtellquery. The types of data identifier are
listed under the 'Data identifier' branch of the EDAM ontology
(http://edamontology.sourceforge.net/). For example values, see the catalogue
of public databases in the EMBOSS data file DRCAT.dat. If you have a data
identifier but are unsure of its type, use idtell.
Required section¶
Additional section¶
Advanced section¶
-database stringThis is the name of a database from the
catalogue of public databases in the EMBOSS data file DRCAT.dat. If you are
unsure of the available databases use drfind. If you have a database name but
are not sure its valid, use isdbname.
-datatype string
This is the name of a retrievable datatype
from the catalogue of public databases in the EMBOSS data file DRCAT.dat. The
names are terms from the 'data' branch of the EDAM ontology,
http://edamontology.sourceforge.net/. If you are unsure of the available
retrievable datatypes for a given database, use dbtellquery. If you have a
datatype name but are not sure its valid, use isdbdata.
Output section¶
-outfile outfileDefault value: stdout
Html section¶
-html booleanIf you are sending the output to a file, this
will format it for displaying as a table in a WWW document. Default value:
N
BUGS¶
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).SEE ALSO¶
dbshowquery is fully documented via the tfm(1) system.AUTHOR¶
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>Wrote the script used to autogenerate this
manual page.
COPYRIGHT¶
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.05/11/2012 | EMBOSS 6.4.0 |