NAME¶
xform2dfield - Transformation to Deformation Field
SYNOPSIS¶
xform2dfield OutputPath ReferenceImage XformList
DESCRIPTION¶
Convert parametric rigid or nonrigid transformation to deformation field,
sampled at pixel locations of a given reference image
OPTIONS¶
- --help
- Write list of basic command line options to standard
output.
- --help-all
- Write complete list of basic and advanced command line
options to standard output.
- --wiki
- Write list of command line options to standard output in
MediaWiki markup.
- --man
- Write man page source in 'nroff' markup to standard
output.
- --version
- Write toolkit version to standard output.
- --echo
- Write the current command line to standard output.
- --verbose-level <integer>
- Set verbosity level.
- --verbose, -v
- Increment verbosity level by 1 (deprecated; supported for
backward compatibility).
- --threads <integer>
- Set maximum number of parallel threads (for POSIX threads
and OpenMP).
Main Options¶
- --mask, -m
- Use reference image pixels as a binary mask.
- --inversion-tolerance-factor
<double>
- Factor for numerical tolerance of B-spline inversion
[multiples of minimum grid pixel size; default=0.1] [Default:
0.1]
- --downsample <string>
- Downsample grid by factors 'x,y,z' or by single factor
'xyz' [Default: NONE]
- --output-absolute
- Make output deformation field with absolute target location
vectors, rather than relative offset vectors.
AUTHORS¶
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis,
Calvin R. Maurer, and Daniel B. Russakoff
LICENSE¶
http://www.fsf.org/licensing/licenses/gpl.html
BUGS¶
Report bugs at
http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS¶
From April 2009 through September 2011, CMTK Development and Maintenance was
supported by the National Institute of Biomedical Imaging and Bioengineering
under Grant No.R01 EB008381 (PI: Torsten Rohlfing).