NAME¶
mk_phantom_3d - Generate phantom image
SYNOPSIS¶
mk_phantom_3d [options] command0 [command1 ...] sphere x,y,z radius value
box x0,y0,z0 x1,y1,z1 value
DESCRIPTION¶
Generate 3D digital phantom images using a selection of drawing commands
OPTIONS¶
- --help
- Write list of basic command line options to standard
output.
- --help-all
- Write complete list of basic and advanced command line
options to standard output.
- --wiki
- Write list of command line options to standard output in
MediaWiki markup.
- --man
- Write man page source in 'nroff' markup to standard
output.
- --version
- Write toolkit version to standard output.
- --echo
- Write the current command line to standard output.
- --verbose-level <integer>
- Set verbosity level.
- --verbose, -v
- Increment verbosity level by 1 (deprecated; supported for
backward compatibility).
- --threads <integer>
- Set maximum number of parallel threads (for POSIX threads
and OpenMP).
Main Options¶
- --dims <string>, -D
<string>
- Set dimensions in voxels
- --voxel <string>, -V
<string>
- Set voxel size in [mm]
- --coordinates
- Coordinate specification mode. Supported values:
"indexed", "absolute", "relative", where the
default is "indexed", or use one of the following:
- --indexed
- Use grid indexes to specify coordinates. For each
dimension, the valid value range is [0,Dims-1]. [This is the
default]
- --absolute
- Use absolute volume coordinates. For each dimension, the
valid range is [0,FOV].
- --relative
- Use relative volume coordinates. For each dimension, the
valid range is [0,1].
- --char, -c
- 8 bits, signed
- --byte, -b
- 8 bits, unsigned
- --short, -s
- 16 bits, signed
- --ushort, -u
- 16 bits, unsigned [This is the default]
- --int, -i
- 32 bits signed
- --float, -f
- 32 bits floating point
- --double, -d
- 64 bits floating point
- --bg <double>, -B
<double>
- Set the image background value (use to initialize newly
created image). [Default: 0]
- --import <string>, -I
<string>
- Import image [Default: NONE]
- --import-grid <string>
- Import image grid only, ignore data [Default:
disabled]
- --outfile <string>, -o
<string>
- File name for output image [Default: phantom.nii
]
AUTHORS¶
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis,
Calvin R. Maurer, and Daniel B. Russakoff
LICENSE¶
http://www.fsf.org/licensing/licenses/gpl.html
BUGS¶
Report bugs at
http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS¶
From April 2009 through September 2011, CMTK Development and Maintenance was
supported by the National Institute of Biomedical Imaging and Bioengineering
under Grant No.R01 EB008381 (PI: Torsten Rohlfing).
