NAME¶
fit_spline_xform - Fit Single B-Spline Transformation to Concatenated
Transformation List
SYNOPSIS¶
fit_spline_xform InputImage XformList
DESCRIPTION¶
Fit a parametric nonrigid transformation (B-spline free-form deformation) to a
list of concatenated, optionally inverted, transformations.
OPTIONS¶
- --help
- Write list of basic command line options to standard
output.
- --help-all
- Write complete list of basic and advanced command line
options to standard output.
- --wiki
- Write list of command line options to standard output in
MediaWiki markup.
- --man
- Write man page source in 'nroff' markup to standard
output.
- --version
- Write toolkit version to standard output.
- --echo
- Write the current command line to standard output.
- --verbose-level <integer>
- Set verbosity level.
- --verbose, -v
- Increment verbosity level by 1 (deprecated; supported for
backward compatibility).
- --threads <integer>
- Set maximum number of parallel threads (for POSIX threads
and OpenMP).
Fitting Options¶
- --levels <integer>
- Number of levels in the multi-level B-spline approximation
procedure. [Default: 1]
- --fit-affine-first
- Fit affine transformation first, then initialize spline
with it.
- --final-cp-spacing <double>
- Final control point grid spacing of the output B-spline
transformation. [Default: 0]
- --final-cp-dims <string>
- Final control point grid dimensions (i.e., number of
controlpoints) of the output B-spline transformation. To be provided as
'dimX,dimY,dimZ'. [Default: NONE]
- --inversion-tolerance <double>
- Numerical tolerance of B-spline inversion in mm. Smaller
values will lead to more accurate inversion, but may increase failure
rate. [Default: 1e-08]
Output Options¶
- --output <transformation-path>,
-o <transformation-path>
- Path for the output transformation. [Default:
NONE]
AUTHORS¶
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis,
Calvin R. Maurer, and Daniel B. Russakoff
LICENSE¶
http://www.fsf.org/licensing/licenses/gpl.html
BUGS¶
Report bugs at
http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS¶
From April 2009 through September 2011, CMTK Development and Maintenance was
supported by the National Institute of Biomedical Imaging and Bioengineering
under Grant No.R01 EB008381 (PI: Torsten Rohlfing).