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srf2fasta(1) | Staden io_lib | srf2fasta(1) |
NAME¶
srf2fasta - Converts SRF files to fasta formatSYNOPSIS¶
srf2fasta [-C] srf_archiveDESCRIPTION¶
srf2fasta extracts sequences from an SRF archive and writes them in fasta format to stdout.OPTIONS¶
- -C
- Masks out sequences tagged as bad quality.
EXAMPLES¶
To extract only the good quality sequences from runX.srf into runX.fasta.srf2fasta -C runX.srf > runX.fasta
AUTHOR¶
James Bonfield, Wellcome Trust Sanger InstituteSeptember 19 |