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SURPYVOR(1) User Commands SURPYVOR(1)

NAME

surpyvor - modification of VCF files with SURVIVOR

DESCRIPTION

usage: surpyvor [-h] [-v] {merge,highsens,highconf,prf,venn,upset} ...

A wrapper around SURVIVOR, with convenience functions.

optional arguments:

show this help message and exit
Print version and quit.

[sub-commands]:

{merge,highsens,highconf,prf,venn,upset}
merging vcf files of SVs
get union of SV vcfs
get intersection of SV vcfs
calculate precision, recall and F-measure
Make venn diagram for 2 or 3 SV vcf files
Make upset plot for multiple SV vcf files

AUTHOR


This manpage was written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.

July 2021 surpyvor 0.5