NAME¶

vcfinfosummarize

SYNOPSIS¶

vcfinfosummarize options

DESCRIPTION¶

Take annotations given in the per-sample fields and add the mean, median, min, or max to the site-level INFO.

OPTIONS¶

options:


    -f, --field         Summarize this field in the INFO column


    -i, --info          Store the computed statistic in this info field


    -a, --average       Take the mean for field (default)


    -m, --median        Use the median


    -n, --min           Use the min


    -x, --max           Use the max


    -h, --help          Print this message


    -v, --version       Print version
    

EXIT VALUES¶

0

Success

not 0

Failure

SEE ALSO¶

vcflib(1)

OTHER¶

LICENSE¶

Copyright 2011-2023 (C) Erik Garrison and vcflib contributors. MIT licensed.

AUTHORS¶

Erik Garrison and vcflib contributors.