NAME¶

vcfhetcount

SYNOPSIS¶

vcfhetcount

DESCRIPTION¶

Calculate the heterozygosity rate: count the number of alternate alleles in heterozygous genotypes in all records in the vcf file

OPTIONS¶

outputs a count for each individual in the file
Type: metrics
    

EXIT VALUES¶

0

Success

not 0

Failure

SEE ALSO¶

vcflib(1)

OTHER¶

LICENSE¶

Copyright 2011-2023 (C) Erik Garrison and vcflib contributors. MIT licensed.

AUTHORS¶

Erik Garrison and vcflib contributors.