NAME¶
rsem-bam2wig - Convert BAM files to wiggle files.
SYNOPSIS¶
rsem-bam2wig sorted_alignment_file wig_output wiggle_name
[--no-fractional-weight]
DESCRIPTION¶
Number of arguments is not correct!
sorted_alignment_file : Can be either in SAM/BAM/CRAM format, must
be sorted wig_output : Output wiggle file's name, e.g. output.wig
wiggle_name : the name of this wiggle plot --no-fractional-weight :
If this is set, RSEM will not look for "ZW" tag and each alignment
appeared in the BAM file has weight 1. Set this if your BAM file is not
generated by RSEM. Please note that this option must be at the end of the
command line.