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REAPR-SEQRENAME(1) |
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REAPR-SEQRENAME(1) |
NAME¶
reapr-seqrename - renames all sequences in a BAM file
SYNOPSIS¶
reapr seqrename <renamefile> <in.bam> <out.bam>
DESCRIPTION¶
<renamefile> is the file .info made by facheck, which contains the
mapping of old name to new name.