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DEBRUIJN(1) |
NCBI Tools User's Manual |
DEBRUIJN(1) |
NAME¶
debruijn - de Bruijn sequence generator
SYNOPSIS¶
debruijn [-] -a str -n k
DESCRIPTION¶
debruijn generates (on standard output) a string over the specified
alphabet containing every possible word (substring) of the specified length
exactly once. Note: Substrings are not taken to wrap around, so the
first k-1 characters repeat at the end.
OPTIONS¶
A summary of options is included below.
- -
- Print usage message.
- -a str
- Alphabet (supply ncbistdaa or ncbi2na for standard
alphabets, or supply your own alphabet).
- -n k
- Word size.
AUTHOR¶
The National Center for Biotechnology Information.