table of contents
SWISS::DTs(3pm) | User Contributed Perl Documentation | SWISS::DTs(3pm) |
Name¶
SWISS::DTsDescription¶
SWISS::DTs represents the DT lines within an Swiss-Prot + TrEMBL entry as specified in the user manual http://www.expasy.org/sprot/userman.html .Inherits from¶
SWISS::BaseClass.pmAttributes¶
- "CREATED_date"
- Creation date
- "ANN_date"
- Last annotation update
- "SQ_date"
- Last Sequence update
- "CREATED_rel"
- Created for release
- "ANN_rel"
- Last annotation for release
- "SQ_rel"
- Last sequence update for release
- "ANN_version"
- Version number for entry annotation
- "SQ_version"
- Version number for sequence
Methods¶
Standard methods¶
- new
- fromText
- toText
- sort
Writing methods¶
- set_Created ($date, $release)
- set_AnnotationUpdate ($date, $release[, $version])
- set_SequenceUpdate ($date, $release[, $version])
TRANSITION¶
The format of the DT line will change in early 2004 from:DT 01-JUL-1993 (Rel. 26, Created) DT 01-JUL-1993 (Rel. 26, Last sequence update) DT 28-FEB-2003 (Rel. 41, Last annotation update)
to:
DT 01-JUL-1993, integrated into UniProtKB/Swiss-Prot. DT 01-JUL-1993, sequence version 36. DT 28-FEB-2003, entry version 54.
This module supports both formats. To convert an entry from the old to the new format, do:
$entry->DTs->CREATED_rel("UniProtKB/Swiss-Prot"); $entry->DTs->ANN_version(54); $entry->DTs->SQ_version(36);
2008-07-11 | perl v5.20.2 |