table of contents
GT-READJOINER-OVER(1) | GenomeTools Manual | GT-READJOINER-OVER(1) |
NAME¶
gt-readjoiner-overlap - Compute suffix prefix matches from encoded sequence.SYNOPSIS¶
gt readjoiner overlap [option ...] [file]DESCRIPTION¶
-readset [string]specify the readset name (default: undefined)
-l [value]
specify the minimum SPM length (default: 0)
-parts [value]
specify the number of parts (default: 0)
-memlimit [string]
specify maximal amount of memory to be used during index
construction (in bytes, the keywords MB and GB are allowed)
(default: undefined)
-v [yes|no]
be verbose (default: no)
-q [yes|no]
suppress standard output messages (default: no)
-help
display help and exit
-version
display version information and exit
REPORTING BUGS¶
Report bugs to <gt-users@genometools.org>.01/06/2017 | GenomeTools 1.5.9 |