table of contents
GT-LTRCLUSTERING(1) | GenomeTools Manual | GT-LTRCLUSTERING(1) |
NAME¶
gt-ltrclustering - Cluster features of LTRs.SYNOPSIS¶
gt ltrclustering [option ...] indexname [GFF3_file ...]DESCRIPTION¶
-psmall [value]specify how many percent of the smaller sequence a match
needs to cover in order to cluster the two sequences of the match. (default:
0)
-plarge [value]
specify how many percent of the larger sequence a match
needs to cover in order to cluster the two sequences of the match. (default:
0)
-o [filename]
redirect output to specified file (default:
undefined)
-gzip [yes|no]
write gzip compressed output file (default: no)
-bzip2 [yes|no]
write bzip2 compressed output file (default: no)
-force [yes|no]
force writing to output file (default: no)
-help
display help and exit
-version
display version information and exit
REPORTING BUGS¶
Report bugs to <gt-users@genometools.org>.01/06/2017 | GenomeTools 1.5.9 |