NAME¶
tigr-glimmer - runs various programs of the TIGR Glimmer suite
SYNOPSIS¶
tigr-glimmer program [arguments]
DESCRIPTION¶
This manual page documents briefly the
tigr-glimmer wrapper to the TIGR
Glimmer programs. This manual page was written for the Debian GNU/Linux
distribution because upstream does not provide this wrapper and it was
invented for Debian to avoid conflicts with other packages that might cause a
name space polution.
tigr-glimmer is just a wrapper that invokes the various programs in the
TIGR Glimmer software package. You can get more detailed documentation in
/usr/share/doc/tigr-glimmer. Please note that the documentation there is a
part of the former version Glimmer 2. The version Glimmer 3 has some features
that were described in the notes.pdf document inside the documentation
directory.
The following programs are included: anomaly, build-fixed, build-icm,
entropy-profile, entropy-score, extract, glimmer3, long-orfs, multi-extract,
score-fixed, start-codon-distrib, test, uncovered and window-acgt.
OPTIONS¶
There are no options.
EXAMPLES¶
- tigr-glimmer build-icm
- tigr-glimmer long-orfs
SEE ALSO¶
For the pre previously packaged version Glimmer2 some text files from the
documentation were turned to man pages for the Debian GNU/Linux distribution
by Steffen Moeller <moeller@debian.org>
AUTHORS¶
This manual page was written by Andreas Tille <tille@debian.org>, for the
Debian GNU/Linux system (but may be used by others).