NAME¶
Bio::TreeIO::nhx - TreeIO implementation for parsing
Newick/New Hampshire eXtendend (NHX) format.
SYNOPSIS¶
# do not use this module directly
use Bio::TreeIO;
my $treeio = Bio::TreeIO->new(-format => 'nhx', -file => 'tree.dnd');
my $tree = $treeio->next_tree;
DESCRIPTION¶
This module handles parsing and writing of Newick/New Hampshire eXtended (NHX)
format.
FEEDBACK¶
Mailing Lists¶
User feedback is an integral part of the evolution of this and other Bioperl
modules. Send your comments and suggestions preferably to the Bioperl mailing
list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support¶
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive
experts will be able look at the problem and quickly address it. Please
include a thorough description of the problem with code and data examples if
at all possible.
Reporting Bugs¶
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs
and their resolution. Bug reports can be submitted viax the web:
https://github.com/bioperl/bioperl-live/issues
AUTHOR - Aaron Mackey¶
Email amackey-at-virginia.edu
CONTRIBUTORS¶
Email jason-at-bioperl-dot-org
APPENDIX¶
The rest of the documentation details each of the object methods. Internal
methods are usually preceded with a _