NAME¶
Bio::SeqFeature::Gene::UTR - A feature representing an untranslated region
that is part of a transcriptional unit
SYNOPSIS¶
See documentation of methods
DESCRIPTION¶
A UTR is a Bio::SeqFeature::Gene::ExonI compliant object that is non-coding, and
can be either 5' or 3' in a transcript.
FEEDBACK¶
Mailing Lists¶
User feedback is an integral part of the evolution of this and other Bioperl
modules. Send your comments and suggestions preferably to the Bioperl mailing
list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support¶
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive
experts will be able look at the problem and quickly address it. Please
include a thorough description of the problem with code and data examples if
at all possible.
Reporting Bugs¶
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs
and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
AUTHOR - David Block¶
Email dblock@gene.pbi.nrc.ca
CONTRIBUTORS¶
This is based on the Gene Structure scaffolding erected by Hilmar Lapp
(hlapp@gmx.net).
APPENDIX¶
The rest of the documentation details each of the object methods. Internal
methods are usually preceded with a _
new¶
Title : new
Usage :
Function: We override the constructor here to set is_coding to false
unless explicitly overridden.
Example :
Returns :
Args :
primary_tag¶
Title : primary_tag
Usage : $tag = $feat->primary_tag()
Function: Returns the primary tag for a feature,
eg 'utr5prime'. This method insures that 5prime/3prime information
is uniformly stored
Returns : a string
Args : none