Scroll to navigation

GT-ENCSEQ-BITEXTRA(1) GenomeTools Manual GT-ENCSEQ-BITEXTRA(1)

NAME

gt-encseq-bitextract - Extracts internal data from encoded sequences.

SYNOPSIS

gt encseq bitextract [option ...] [indexname]

DESCRIPTION

-mirrored [yes|no]
mirror sequence (default: no)
-stoppos [value]
output stop positions (default: undefined)
-specialranges [yes|no]
output special ranges (default: no)
-bitpos [value]
extract and display two bit encoding for position (default: undefined)
-dir [string]
specify reading direction (fwd, cpl, rev, rcl) (default: fwd)
-help
display help and exit
-version
display version information and exit

REPORTING BUGS

Report bugs to <gt-users@genometools.org>.
09/05/2014 GenomeTools 1.5.3