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FASTAQ_TO_ORFS_GFF(1) | Fastaq executables | FASTAQ_TO_ORFS_GFF(1) |
NAME¶
fastaq_to_orfs_gffDESCRIPTION¶
fastaq_to_orfs_gff [options] <fasta/q in> <gff_out> Writes a GFF file of open reading frames from a fasta/q file
positional arguments:¶
- infile
- Name of input fasta/q file
- gff_out
- Name of output gff file
optional arguments:¶
- -h, --help
- show this help message and exit
- --min_length INT
- Minimum length of ORF, in nucleotides [300]
AUTHOR¶
fastaq_to_orfs_gff was originally written by Martin Hunt (mh12@sanger.ac.uk)COPYING¶
Wellcome Trust Sanger Institute Copyright © 2013 Wellcome Trust Sanger Institute This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version.October 2014 | Fastaq |