NAME¶
fit_affine_xform - Fit Single Affine Transformation to Concatenated List
SYNOPSIS¶
fit_affine_xform InputImage XformList
DESCRIPTION¶
Fit a linear affine transformation to a list of concatenated, optionally
inverted, transformations.
OPTIONS¶
- --help
- Write list of basic command line options to standard output.
- --help-all
- Write complete list of basic and advanced command line options to standard
output.
- --wiki
- Write list of command line options to standard output in MediaWiki
markup.
- --man
- Write man page source in 'nroff' markup to standard output.
- --version
- Write toolkit version to standard output.
- --echo
- Write the current command line to standard output.
- --verbose-level <integer>
- Set verbosity level.
- --verbose, -v
- Increment verbosity level by 1 (deprecated; supported for backward
compatibility).
- --threads <integer>
- Set maximum number of parallel threads (for POSIX threads and
OpenMP).
- --inversion-tolerance <double>
- Numerical tolerance of B-spline inversion in mm. Smaller values will lead
to more accurate inversion, but may increase failure rate. [Default:
1e-08]
Fitting Options¶
- --rigid
- Fit rigid transformation (rotation and translation only) using SVD.
- --affine
- Fit full affine transformation (rotation, translation, scales, shears)
using pseudoinverse. [This is the default]
Output Options¶
- --output <transformation-path>, -o
<transformation-path>
- Path for the output transformation. [Default: NONE]
AUTHORS¶
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis,
Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko
LICENSE¶
http://www.fsf.org/licensing/licenses/gpl.html
BUGS¶
Report bugs at
http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS¶
CMTK is developed with support from the NIAAA under Grant AA021697, National
Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data
Integration Component. From April 2009 through September 2011, CMTK
development and maintenance was supported by the NIBIB under Grant
EB008381.