table of contents
other versions
- jessie-backports 3.8.0+dfsg-1~bpo8+1
- stretch 3.8.0+dfsg-1
- testing 3.12.0+dfsg-2
- stretch-backports 3.12.0+dfsg-2~bpo9+1
- unstable 3.12.0+dfsg-2
Bio::Roary::AccessoryClustering(3pm) | User Contributed Perl Documentation | Bio::Roary::AccessoryClustering(3pm) |
NAME¶
Bio::Roary::AccessoryClustering - Take an a clusters file from CD-hit and the fasta file and output a fasta file without full clustersVERSION¶
version 3.8.0SYNOPSIS¶
Take an a clusters file from CD-hit and the fasta file and output a fasta file without full clustersuse Bio::Roary::AccessoryClustering;
my $obj = Bio::Roary::AccessoryClustering->new( input_file => 'accessory_binary_genes.fa', identity => 0.96, cpus => 10, ); $obj->sample_weights();
AUTHOR¶
Andrew J. Page <ap13@sanger.ac.uk>COPYRIGHT AND LICENSE¶
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute. This is free software, licensed under:The GNU General Public License, Version 3, June 2007
2017-08-10 | perl v5.20.2 |