NAME¶
Bio::Roary::External::GeneAlignmentFromNucleotides - Take in multi-FASTA files
of nucleotides and align each file with PRANK or MAFFT
SYNOPSIS¶
Take in multi-FASTA files of nucleotides and align each file with PRANK or MAFFT
use Bio::Roary::External::GeneAlignmentFromNucleotides;
my $seg = Bio::Roary::External::GeneAlignmentFromNucleotides->new(
fasta_files => [],
);
$seg->run();
METHODS¶
output_file¶
Returns the path to the results file
AUTHOR¶
Andrew J. Page <ap13@sanger.ac.uk>
COPYRIGHT AND LICENSE¶
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007