NAME¶
quorum_create_database - create database of k-mers for quorum error corrector
SYNOPSIS¶
create_database_cmdline [options] reads:path+
DESCRIPTION¶
Create database of k-mers for quorum error corrector
Create k-mer database for quorum_error_correct
OPTIONS¶
default value in (), *required:
- -s, --size=uint64
- *Initial hash size
- -m, --mer=uint32
- *Mer length
- -b, --bits=uint32
- *Bits for value field
- -q, --min-qual-value=uint32
- Min quality as an int
- -Q, --min-qual-char=string
- Min quality as a ASCII character
- -t, --threads=uint32
- Number of threads (1)
- -o, --output=path
- Output file (combined_database)
- -p, --reprobe=int32
- Maximum number of reprobes (126)
- -U, --usage
- Usage
- -h, --help
- This message
- -V, --version
- Version
AUTHOR¶
This manpage was written by Andreas Tille for the Debian distribution and can be
used for any other usage of the program.
