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PXFQFILT(1)

User Commands

PXFQFILT(1)

NAME¶

pxfqfilt - Filter fastq files by mean quality.

SYNOPSIS¶

pxfqfilt [OPTION]... [FILE]...

DESCRIPTION¶

Filter fastq files by mean quality. Can read from stdin or file.

-m, --mean=VALUE: mean value under which seqs are filtered
-s, --seqf=FILE: input sequence file, stdin otherwise
-o, --outf=FILE: output sequence file, stout otherwise
-h, --help: display this help and exit
-V, --version: display version and exit

REPORTING BUGS¶

Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>

AUTHOR¶

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

May 2018

pxfqfilt 0.99+ds