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| PHAST(1) |
User Commands |
PHAST(1) |
NAME¶
phast - phylogenetic analysis with space/time models
DESCRIPTION¶
The PHAST package contains the following programs:
- all_dists
- hmm_view phastBias
- base_evolve
- indelFit phastCons
- chooseLines
- indelHistory phastMotif
- clean_genes
- maf_parse phastOdds
- consEntropy
- makeHKY phyloBoot
- convert_coords
- modFreqs phyloFit
- display_rate_matrix
- msa_diff phyloP
- dless
- msa_split prequel
- dlessP
- msa_view refeature
- draw_tree
- pbsDecode stringiphy
- eval_predictions
- pbsEncode test
- exoniphy
- pbsScoreMatrix tree_doctor
- hmm_train
- pbsTrain treeGen
- hmm_tweak
- phast
- For help, type the program's name followed by -h in your command
line window.
