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MAUVEALIGNMENT2ANCHORS(1) User Contributed Perl Documentation MAUVEALIGNMENT2ANCHORS(1)

NAME

mauveAlignment2anchors - converts a Mauve alignment into Murasaki anchor format based on gapped alignment data (each gap triggers a new anchor). Note this refers to the Mauve alignment format, not the LAGAN .alignment file that Mauve also outputs.

SYNOPSIS

mauveAlignment2anchors <input> [output]

OPTIONS

  --autoout -- create output file name automatically (on by default)
  --noautoout -- disable the above "autoout" option
2018-10-08 perl v5.26.2