table of contents
CHROMOSTITCH(1) | User Contributed Perl Documentation | CHROMOSTITCH(1) |
NAME¶
chromostitch.pl - Makes stitch files for feeding to geneparse.pl to allow feeding of multiple chromosomes to programs like murasakiSYNOPSIS¶
chromostitch.pl [options] <stitch file> <chromosome1 chromosome2 ... >- Options:
- --sort sorts everything
- --output=<file> altnerate way of specifying an output file
PARAMETERS¶
- stitch file output file (overwrites)
- chromosome1 chromosome2 ... List of chromosome input files
- B--output=<file> Alternate way of specifying an output file
- B--sort Always sort EVERYTHING. (Allows for nicely sorted lists from sloppy input of filenames from like multiple directories of *.gbk or something)
DESCRIPTION¶
Makes stitch files for feeding to geneparse.pl to allow feeding of multiple chromosomes to programs like murasaki2018-10-08 | perl v5.26.2 |