SHOWORF(1e) | EMBOSS Manual for Debian | SHOWORF(1e) |
NAME¶
showorf - Display a nucleotide sequence and translation in pretty formatSYNOPSIS¶
showorf -sequence sequence -frames list [-table list] -outfile outfile [-ruler boolean] [-plabel boolean] [-nlabel boolean] -width integer
showorf -help
DESCRIPTION¶
showorf is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Gene finding,Nucleic:Translation" command group(s).OPTIONS¶
Input section¶
-sequence sequenceRequired section¶
-frames listDefault value: 1,2,3,4,5,6
Additional section¶
-table listOutput section¶
-outfile outfile-ruler boolean
Default value: Y
-plabel boolean
Default value: Y
-nlabel boolean
Default value: Y
-width integer
Default value: 50
BUGS¶
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).SEE ALSO¶
showorf is fully documented via the tfm(1) system.AUTHOR¶
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>Wrote the script used to autogenerate this manual
page.
COPYRIGHT¶
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
05/11/2012 | EMBOSS 6.4.0 |