NAME¶

SYNOPSIS¶

DESCRIPTION¶

OPTIONS¶

-h, --host www.crystallography.net

-s, --server www.crystallography.net Query COD database on the host 'www.crystallography.net'.

-l, --localhost Use database server on the localhost to query the COD database.

-p, --port 3306 Use the specified port (default 3306) to query structures.

--platform mysql Use specified SQL platform (default mysql).

-u, --user cod_reader Use user name "cod_reader" to access COD database; this reader should be granted SELECT privilege, i.e. should be able to read the COD database, without supplying a password.

--password Use the specified password (default empty) to connect.

--vocabulary-namespace cod Use vocabulary namespace "cod" to prefix properties native to the queried database.

--vocabulary-url-prefix http://www.crystallography.net/cod/doc/rdf/ Specify URL prefix for database's native namespace.

--prefix, --db-url-prefix http://www.crystallography.net/cod/ Specify URL prefix for all objects in the queried database.

--postfix, --db-url-postfix .html Specify URL postfix for all objects in the queried database.

--def-table, --definition-table databases Look "databases" table for descriptions of remote databases.

--db-name, --database-name cod Use "cod" as the abbreviation of queried databases. This abbreviation is used in construction of cross-referencing table names, i.e. "pubchem_x_cod".

--from Generate RDFs for all database entries starting at specified entry and ending at either the entry specified using '--to' command line option or the last entry in the database.

--to Generate RDFs for all database entries from either the entry specified using '--from' command line option or the first entry in the database.

--range Generate RDFs for all database entries in the specified range. Range should be specified in the form 'X-Y', where X is the first and Y is the last entry.

--revision Generate RDFs for all database entries deposited in the specified or older Subversion revision of the database.

--split-author-names Split author names in internal database representation at semicolons (';') to produce RDF-parsable list of author names. Each author in such list is marked with "author" property instead of "authors", which is used for non-split value (default).

--no-split-author-names, --dont-split-author-names Make no assumptions about internal database representation of author list.

--xml-output Output RDF in XML carrier format (default).

--n3-output Output RDF in N3 (Notation3) carrier format.

--turtle-output Output RDF in Turtle carrier format.

--ntriples-output, --n-triples-output Output RDF in N-Triples carrier format.

--replace-utf-codepoints-from Replace Unicode code points starting at specified point with carrier format-specific entities.

--no-replace-utf-codepoints, --dont-replace-utf-code-points Leave Unicode code points unescaped (default).

--html-utf-escapes Escape Unicode code points using HTML hexadecimal format corresponding to '&#x%04X;' formatted string (default).

--internal-utf-escapes Escape Unicode code points using internal format corresponding to '\u%04X' formatted string.

--utf-escape-format Escape Unicode code points using format corresponding to the provided formatted string.

--help, --usage Output a short usage message (this message) and exit.

--version Output version information and exit.

REPORTING BUGS¶