| BIOM(1) | User Commands | BIOM(1) |
NAME¶
biom - Biological Observation Matrix (BIOM) format (Python 3)
SYNOPSIS¶
biom [OPTIONS] COMMAND [ARGS]...
OPTIONS¶
- --version
- Show the version and exit.
- -h, --help
- Show this message and exit.
Commands:¶
- add-metadata
- Add metadata to a BIOM table.
- convert
- Convert to/from the BIOM table format.
- export-metadata
- Export metadata as TSV.
- from-uc
- Create a BIOM table from a vsearch/uclust/usearch BIOM...
- head
- Dump the first bit of a table.
- normalize-table
- Normalize a BIOM table.
- show-install-info
- Provide information about the biom-format installation.
- subset-table
- Subset a BIOM table.
- summarize-table
- Summarize sample or observation data in a BIOM table.
- table-ids
- Dump IDs in a table.
- validate-table
- Validate a BIOM-formatted file.
AUTHOR¶
This manpage was written by Nilesh Patra for the Debian
distribution and
can be used for any other usage of the program.
| July 2020 | biom 2.1.8 |