table of contents
SWISS::GN(3pm) | User Contributed Perl Documentation | SWISS::GN(3pm) |
Name¶
SWISS::GN.pm
Description¶
SWISS::GN represents one gene name from the GN line. The container object for several synonym gene names is SWISS::GeneGroup.
Inherits from¶
SWISS::BaseClass.pm
Attributes¶
- "text"
- One gene name.
Methods¶
Standard methods¶
Reading/Writing methods¶
- toMixedCase(@regexps)
- Convert gene names to mixed case, according to one or more regular expressions. This is typically useful for converting uppercase ORF numbers to mixed case. E.g. the E.coli gene "B1563" converted with the regexp '(b(\d{4}(\.\d)?))' will yield the gene name "b1563". The method also supports fused gene names, e.g. "B0690/B0691" is converted to "b0690/b0691". The method changes the text of the SWISS::GN object and also returns the new text value.
2020-12-25 | perl v5.32.0 |