table of contents
| SIM_READS(1) | User Commands | SIM_READS(1) |
NAME¶
sim_reads - Convert Fastq sequences to Fasta sequences.
SYNOPSIS¶
sim_reads ref.fa reads.fa
DESCRIPTION¶
sim_reads - Simulate sequencing reads from references.
Allowed Options:¶
- --depth arg (=30)
- sequencing depth of the sample
- --error_rate arg (=0.01)
- error rate
- --read_length arg (=100)
- read length
- --paired
- if paired-end
- --sd arg (=-1)
- sd
- --insert_distance arg (=500)
- insert distance
- --print_correct
- output correct reads
AUTHOR¶
This manpage was written by Andreas Tille for the Debian
distribution and
can be used for any other usage of the program.
| March 2020 | sim_reads 1.1.3 |