xsh_util_physmod - Generate physical model products
esorex xsh_util_physmod [OPTIONS] FILE.sof
This recipe generates the theoretical and the spectral format tables. and possibly the model based wave map.
The sof file contains the names of the input FITS file tagged with XSH_MOD_CFG_TAB_arm.
tagged with ARC_LINE_LIST_arm.
This recipe has the following products: Model order traces for nine pinholes (PRO CATG = THEO_TAB_MULT_arm) Model order traces for nine pinholes (PRO CATG = THEO_TAB_IFU_arm) Model order traces for central pinhole (PRO CATG = THEO_TAB_SING_arm) Spectral format table (PRO CATG = SPECTRAL_FORMAT_TAB_arm) Wave map image (PRO CATG = WAVE_MAP_arm) Slit map image (PRO CATG = SLIT_MAP_arm)
- --keep-temp <str>
- If ´no´, temporary files are deleted. (str; default: ´no´). The full name of this option for the EsoRex configuration file is xsh.xsh_util_physmod.keep-temp [default = no].
- --debug-level <str>
- Additional xshooter debug level. One of ´none´, ´low´, ´medium´, ´high´ (str; default: ´none´). The full name of this option for the EsoRex configuration file is xsh.xsh_util_physmod.debug-level [default = none].
- --time-stamp <bool>
- Add timestamp to product file name. (bool; default: False). The full name of this option for the EsoRex configuration file is xsh.xsh_util_physmod.time-stamp [default = False].
- --decode-bp <int>
- Integer representation of the bits to be considered bad when decoding the bad pixel mask pixel values. Most frequent codes relevant for the user: 0: good pixel, 8: pick-up noise, 16: cosmic-ray removed, 32: cosmic-ray unremoved, 128: calibration file defect, 256: hot pixel, 512: dark pixel, 4096: A/D converted saturation, 32768: non linear pixel, 1048576: extrapolated flux in NIR, 4194304: Interpolated flux during extraction. (int; default: 2144337919). The full name of this option for the EsoRex configuration file is xsh.xsh_util_physmod.decode-bp [default = 2144337919].
- --binx <int>
- X binning (int; default: 1). The full name of this option for the EsoRex configuration file is xsh.xsh_model.binx [default = 1].
- --biny <int>
- X binning (int; default: 1). The full name of this option for the EsoRex configuration file is xsh.xsh_model.biny [default = 1].
- --spectral-format-tab <bool>
- Generate spectral format table (bool; default: False). The full name of this option for the EsoRex configuration file is xsh.xsh_model.spectral_format_tab [default = False].
- --wavemap <bool>
- Generate slit and wave maps (time consuming) (bool; default: False). The full name of this option for the EsoRex configuration file is xsh.xsh_model.wavemap [default = False].
Note that it is possible to create a configuration file containing these options, along with suitable default values. Please refer to the details provided by the 'esorex --help' command.
The full documentation for the xshoo pipeline can be downloaded as a PDF file using the following URL:
An overview over the existing ESO pipelines can be found on the web page https://www.eso.org/sci/software/pipelines/.
Basic documentation about the EsoRex program can be found at the esorex (1) man page.
It is possible to call the pipelines from python using the python-cpl package. See https://packages.python.org/python-cpl/index.html for further information.
The other recipes of the xshoo pipeline are xsh_2dmap(7), xsh_cfg_recover(7), xsh_flexcomp(7), xsh_geom_ifu(7), xsh_lingain(7), xsh_mbias(7), xsh_mdark(7), xsh_mflat(7), xsh_orderpos(7), xsh_predict(7), xsh_respon_slit_nod(7), xsh_respon_slit_offset(7), xsh_respon_slit_stare(7), xsh_scired_ifu_offset(7), xsh_scired_ifu_offset_drl(7), xsh_scired_ifu_stare(7), xsh_scired_ifu_stare_drl(7), xsh_scired_slit_nod(7), xsh_scired_slit_offset(7), xsh_scired_slit_stare(7), xsh_wavecal(7)
Andrea Modigliani <email@example.com>
Please report any problems to firstname.lastname@example.org. Alternatively, you may send a report to the ESO User Support Department <email@example.com>.
This file is part of the X-shooter Instrument Pipeline Copyright (C) 2006 European Southern Observatory
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA